Just to get it out of the way:
Apparently some of the scripts that WHM uses are now linked to as /scripts2/&whatever&... but none of those work for me now? Apache Status is one, CPU/Mem/Mysql Usage History is another.. I played around and found that anything in WHM that links to a /scripts/ location is fine, but anything linking to /scripts2/ for anything comes back either with a server error (Under IE) or a blank page under Mozilla?
Just color me throughly confused. If someone can point me in the right direction to get this fixed, I'd be much appreciated... I miss my Apache status screen!