The whole subject is a little long to go into here but check your /usr/local/apache/conf/httpd.conf for the new VirtualHost container you've created for whatever you called that cert (
[email protected]).
It should look something like this if it's a cert added to an existing site:
<IfDefine SSL>
<VirtualHost xxx.xxx.xxx.xxx:443>
ServerAdmin
[email protected]
DocumentRoot /home/UserName/public_html/secure
BytesLog domlogs/secure.whatever.com-bytes_log
ServerName secure.whatever.com
UserDir public_html
User UserName
Group UserName
ScriptAlias /cgi-bin/ /home/UserName/public_html/secure/cgi-bin/
SSLEnable
SSLCertificateFile /usr/share/ssl/certs/secure.whatever.com.crt
SSLCertificateKeyFile /usr/share/ssl/private/secure.whatever.com.key
SSLCACertificateFile /usr/share/ssl/certs/ca-bundle.crt
SSLLogFile /usr/local/apache/domlogs/secure.whatever.com-ssl_data_log
CustomLog /usr/local/apache/domlogs/secure.whatever.com-ssl_log combined
SetEnvIf User-Agent ".*MSIE.*" nokeepalive ssl-unclean-shutdown
</VirtualHost>
</IfDefine>