MySQL Major Problem!

My websites are slowing down, and I think it's mysql, since on pages where it doesn't connect to a mysql db, my pages load fast. My MySQL Process List shows this:

Code:

+------+---------------+-----------+-----------------+---------+------+----------------+------------------------------------------------------------------------------+
| Id   | User          | Host      | db              | Command | Time | State          | Info                                                                         |
+------+---------------+-----------+-----------------+---------+------+----------------+------------------------------------------------------------------------------+
| 981  | gamefaq2      | localhost | gamefaq2_boards | Query   | 0    | Sorting result | SELECT time FROM messages WHERE board='5552' ORDER BY messageid DESC LIMIT 1 |
| 995  | gamefaq2      | localhost | gamefaq2_boards | Sleep   | 25   |                |                                                                              |
| 997  | gamefaq2      | localhost | gamefaq2_boards | Sleep   | 23   |                |                                                                              |
| 1005 | bihira        | localhost | bihira_forums   | Sleep   | 16   |                |                                                                              |
| 1009 | gamefaq2      | localhost | gamefaq2_boards | Sleep   | 13   |                |                                                                              |
| 1013 | gamefaqs      | localhost | gamefaqs_SQL    | Sleep   | 2    |                |                                                                              |
| 1017 | gamefaq1      | localhost | gamefaq1_boards | Sleep   | 0    |                |                                                                              |
| 1018 | divineth_root | localhost | divineth_boards | Sleep   | 0    |                |                                                                              |
| 1019 | root          | localhost |                 | Query   | 0    |                | show processlist                                                             |
+------+---------------+-----------+-----------------+---------+------+----------------+------------------------------------------------------------------------------+

I have put a timelimit to shut down the process after 30 seconds. I also turned off persistant connections, does anyone have a soulutions and can help me! I have posted this problem before but no one was able to find a solution.

 

I turned persistant back on and repaired the larger db and anyone listed that had the recurring sleep problem. Though the problem still remains.