Remote MySQL server shuts down after upcp command

[abrakadabra]

WHM Server 56 on CentOS 6.7.
Remote MySQL-Server 5.5.49 on CentOS 6.7.

This is ongoing issue since WHM 56, running
/usr/local/cpanel/scripts/upcp, the remote MySQL server is receiving shutdown command and is entering normal shutdown. Once the cPanel update (upcp) is finished, the remote MySQL remains in shutdown state.

mysqld.log

160507  1:23:08 [Note] /usr/sbin/mysqld: Normal shutdown


160507  1:23:08 [Note] Event Scheduler: Purging the queue. 0 events

160507  1:23:10 [Warning] /usr/sbin/mysqld: Forcing close of thread 164473  user: 'eximstats'


160507  1:23:10 [Warning] /usr/sbin/mysqld: Forcing close of thread 164440  user: 'modsec'


160507  1:23:10 [Warning] /usr/sbin/mysqld: Forcing close of thread 162135  user: 'leechprotect'


160507  1:23:10  InnoDB: Starting shutdown...

160507  1:23:10  InnoDB: Waiting for 56 pages to be flushed

160507  1:23:11  InnoDB: Shutdown completed; log sequence number 115570048662

160507  1:23:11 [Note] /usr/sbin/mysqld: Shutdown complete



160507 01:23:11 mysqld_safe mysqld from pid file /var/lib/mysql/xxx.xxx.com.pid ended

The log timestamp matches those of cPanel upcp update.

 

[cPanelMichael]

Hello,

Could you verify if you are using the "WHM >> Manage MySQL Profiles" feature to manage the remote MySQL server? We have an internal case open to address an issue similar to what you have reported, but it's isolated to servers that have configured a redirect from localhost via a direct edit to the /root/.my.cnf file.

Thank you.

 

[abrakadabra]

MySQL profiles are being used, Auto-Migrated active profile.

/root/.my.cnf:

[client]
host="db1.xxx.xxx"
user="root"
password="xxx"

 

[TerranceR]

Hello,

This is a known issue, we have a open Case on this, the Case ID for this Case is CPANEL-6049.

Once this is resolved, it will be listed at Change Logs - Documentation - cPanel Documentation