RPM fix doesn't fix, just tells me to re-run?

[P_W]

Trying to upgrade but I'm getting various RPM errors which tell me to run /usr/local/cpanel/scripts/check_cpanel_rpms --fix, which spits out errors and tells me to run the rpm fix. I'm very confused.

Any help would be appreciated!

# /usr/local/cpanel/scripts/check_cpanel_rpms --fix
[20131212.100525]
[20131212.100525]   Problems were detected with cPanel-provided files which are RPM controlled.
[20131212.100525]   If you did not make these changes intentionally, you can correct them by running:
[20131212.100525]
[20131212.100525]   > /usr/local/cpanel/scripts/check_cpanel_rpms --fix
[20131212.100525]   The following RPMs are missing from your system:
[20131212.100525]   MySQL51-client.5.1.70-1.cp1136
[20131212.100525]   MySQL51-devel.5.1.70-1.cp1136
[20131212.100525]   MySQL51-server.5.1.70-1.cp1136
[20131212.100525]   MySQL51-shared.5.1.70-1.cp1136
[20131212.100525]   MySQL51-test.5.1.70-1.cp1136
[20131212.100525]   courier-authlib.0.65.0-1.cp1136
[20131212.100525]   courier-authlib-devel.0.65.0-1.cp1136
[20131212.100525]   courier-authlib-userdb.0.65.0-1.cp1136
[20131212.100525]   courier-imap.4.12.0-1.cp1136
[20131212.100525]   cpanel-userperl.1.0-1.cp1136
[20131212.100525]   exim.4.80.1-1.cp1136
[20131212.100530]   Removing 0 broken rpms:
[20131212.100530]   rpm: no packages given for erase
[20131212.100532]   Downloading http://httpupdate.cpanel.net/RPM/11.36/centos/5/x86_64/rpm.md5
[20131212.100532]   courier-imap-4.12.0-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   courier-authlib-devel-0.65.0-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   MySQL51-client-5.1.70-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   MySQL51-devel-5.1.70-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   cpanel-userperl-1.0-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   MySQL51-shared-5.1.70-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   MySQL51-test-5.1.70-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   MySQL51-server-5.1.70-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   courier-authlib-0.65.0-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   courier-authlib-userdb-0.65.0-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   exim-4.80.1-1.cp1136.x86_64.rpm already downloaded
[20131212.100532]   Hooks system enabled
[20131212.100532]   Checking for and running RPM::Versions 'pre' hooks for any RPMs about to be installed
warn [check_cpanel_rpms] program "/scripts/precourierup" is not executable
warn [check_cpanel_rpms] program "/scripts/preeximup" is not executable
warn [check_cpanel_rpms] program "/scripts/premysqlup" is not executable
[20131212.100532]   All required 'pre' hooks have been run
[20131212.100533]   No RPMS need to be uninstalled
[20131212.100533]   Installing new rpms: courier-imap-4.12.0-1.cp1136.x86_64.rpm courier-authlib-devel-0.65.0-1.cp1136.x86_64.rpm MySQL51-client-5.1.70-1.cp1136.x86_64.rpm MySQL51-devel-5.1.70-1.cp1136.x86_64.rpm cpanel-userperl-1.0-1.cp1136.x86_64.rpm MySQL51-shared-5.1.70-1.cp1136.x86_64.rpm MySQL51-test-5.1.70-1.cp1136.x86_64.rpm MySQL51-server-5.1.70-1.cp1136.x86_64.rpm courier-authlib-0.65.0-1.cp1136.x86_64.rpm courier-authlib-userdb-0.65.0-1.cp1136.x86_64.rpm exim-4.80.1-1.cp1136.x86_64.rpm
[20131212.100533]   error: Failed dependencies:
[20131212.100533]       libmysqlclient.so.15()(64bit) is needed by (installed) libdbi-dbd-mysql-0.8.1a-1.2.2.x86_64
[20131212.100533]       libmysqlclient.so.15()(64bit) is needed by (installed) mysql-connector-odbc-3.51.12-2.2.x86_64
[20131212.100533]       libmysqlclient.so.15()(64bit) is needed by (installed) mod_auth_mysql-3.0.0-3.1.x86_64
[20131212.100533]       libmysqlclient.so.15()(64bit) is needed by (installed) perl-DBD-MySQL-4.014-1.el5.rfx.x86_64
[20131212.100533]       libmysqlclient.so.15(libmysqlclient_15)(64bit) is needed by (installed) libdbi-dbd-mysql-0.8.1a-1.2.2.x86_64
[20131212.100533]       libmysqlclient.so.15(libmysqlclient_15)(64bit) is needed by (installed) mysql-connector-odbc-3.51.12-2.2.x86_64
[20131212.100533]       libmysqlclient.so.15(libmysqlclient_15)(64bit) is needed by (installed) mod_auth_mysql-3.0.0-3.1.x86_64
[20131212.100533]       libmysqlclient.so.15(libmysqlclient_15)(64bit) is needed by (installed) perl-DBD-MySQL-4.014-1.el5.rfx.x86_64
[20131212.100533]       libmysqlclient_r.so.15()(64bit) is needed by (installed) MySQL-python-1.2.1-1.x86_64
[20131212.100533]       libmysqlclient_r.so.15()(64bit) is needed by (installed) mysql-connector-odbc-3.51.12-2.2.x86_64
[20131212.100533]       libmysqlclient_r.so.15(libmysqlclient_15)(64bit) is needed by (installed) MySQL-python-1.2.1-1.x86_64
[20131212.100533]       libmysqlclient_r.so.15(libmysqlclient_15)(64bit) is needed by (installed) mysql-connector-odbc-3.51.12-2.2.x86_64
[20131212.100533] W Error Code: 11
[20131212.100533] E The following possible errors were detected while installing RPMs:
[20131212.100533] E Failed dependencies
[20131212.100533]   The Administrator will be notified to review this output when this script completes
[20131212.100533]   Checking for and running RPM::Versions 'post' hooks for any RPMs just installed
warn [check_cpanel_rpms] program "/scripts/postcourier-authlibup" is not executable
warn [check_cpanel_rpms] program "/scripts/postcourierinstall" is not executable
warn [check_cpanel_rpms] program "/scripts/postcourierup" is not executable
warn [check_cpanel_rpms] program "/scripts/postcourier-imapup" is not executable
warn [check_cpanel_rpms] program "/scripts/posteximup" is not executable
warn [check_cpanel_rpms] program "/scripts/postmysqlinstall" is not executable
warn [check_cpanel_rpms] program "/scripts/postmysqlup" is not executable
[20131212.100533]   All required 'post' hooks have been run

 

[cPanelMichael]

Hello

Please verify if you require the following RPMs on your system:

libdbi-dbd-mysql-0.8.1a-1.2.2.x86_64
mysql-connector-odbc-3.51.12-2.2.x86_64
mod_auth_mysql-3.0.0-3.1.x86_64
perl-DBD-MySQL-4.014-1.el5.rfx.x86_64
MySQL-python-1.2.1-1.x86_64

It looks like they are the result of third-party applications or custom modifications.

Thank you.

 

[P_W]

Hello

Please verify if you require the following RPMs on your system:

libdbi-dbd-mysql-0.8.1a-1.2.2.x86_64
mysql-connector-odbc-3.51.12-2.2.x86_64
mod_auth_mysql-3.0.0-3.1.x86_64
perl-DBD-MySQL-4.014-1.el5.rfx.x86_64
MySQL-python-1.2.1-1.x86_64

It looks like they are the result of third-party applications or custom modifications.

Thank you.

No, I don't require them. I'm just running a stock cpanel server as far as I'm aware. No special modifications were made (intentionally).

 

[cPanelMichael]

Could you open a support ticket using the link in my signature so we can take a closer look? You can post the ticket number here so we can update this thread with the outcome.

Thank you.

 

[P_W]

cPanelMichael > Sure. It's 4772161

 

[cPanelPeter]

Hello,

The last note on that ticket states you believe you have it figured out and will let us know. Please do let us know what the solution was if in fact you did figure it out so that we can update this thread accordingly.

 

[P_W]

Hello,

The last note on that ticket states you believe you have it figured out and will let us know. Please do let us know what the solution was if in fact you did figure it out so that we can update this thread accordingly.

Not sure what was using those packages, so I just yum removed them, as in...

yum remove libdbi-dbd-mysql mysql-connector-odbc mod_auth_mysql perl-DBD-MySQL MySQL-python

Then re-ran the upgrade, and it was fine.