Cpanel redid all my kde packages, koffice, and just about every imaginable package on my machine. Why is it doing this - I doubt cpanel will use koffice and x11 libraries! plus about 50 other things it installed.
What I did was run the script latest just like the website said. It did install koffice and kde libs and a bunch of other things. When it starts it says installing cpanel 4.6 layer one. It seems to be going through and fixing apache and other things so I don't know what is up